KUALA LUMPUR | 2- DAY WORKSHOP IN NGS DATA ANALYSIS | WHOLE GENOME, RNA & METAGENOMICS

Jan 26, 2021 09:30 AM - Jan 27, 2021 04:30 PM (Asia/Kolkata)

Wisma UOA II, KLCC, Level 6, Lobby A, Wisma UOA II, No 21 Jalan Pinang

Kuala Lumpur

Registrations are not available

Overview

BDG LifeSciences (OPC) Pvt. Ltd. is an expert in conducting Training, Novel Research Projects, Workshops & Online Courses in technologies of Bioinformatics. Started in 2010 to date, we have successfully trained hundreds of participants who were not only students but scientists, faculties, professors, company executives, etc from India as well as other countries.As we believe in a different way of learning which is HANDS-ON PRACTICAL SESSIONS our workshops are unique because participants perform on their own computer/laptop on software/servers, so it is the practical application of technology which is the main reason for our success where we have conducted 100+ workshops around the world on the latest technologies of Bioinformatics especially Drug Discovery & Designing, MD Simulations, NGS Data Analysis and Gene & Genome Editing by CRISPR/Cas9.

After several successful workshops in Kuala Lumpur & Langkawi, we are glad to announce 2-day Technical Certificate Training in Next Generation Sequencing Data Analysis | Whole Genome (DNA) Seq, RNASeq & MetaGenomics in Kuala Lumpur, Malaysia.

It will be an extensive 2-day training program for which participants have to bring their own laptop having Windows/Mac/Linux so the participants can use that for running the processes on their own computer systems- HANDS-ON with complete learning of Next Generation Sequencing Data Analysis. The course will be of great help to students/ researchers/ faculty/ scientists in learning this latest science and technology. To see the pictures of our previous events click here and click here. For all our upcoming events click here and for previous successfully completed workshops click here. To view the video feedback of our previous events kindly visit our YouTube Channel

COMPLIMENTARY

  • Tea/Coffee & Snacks for 2 days of the workshop.
  • Workshop Material
  • Handouts
  • Papers of Technology
  • Certificate 

TRAVEL, ACCOMMODATION & FOOD YOU HAVE TO MANAGE ON YOUR OWN

TOPICS

  • Introduction to Bioinformatics
  • Understanding Genomics and Bioinformatics
  • Various Databases, Browsers and Tools (NCBI; e.g. Gene Bank and PubMed, ENA, UCSC, BLAST etc.).
  • Gene Finding and Genome Visualizations.
  • Data Retrieval (e.g. Searching SRA Data from NCBI).
  • Introduction to NGS.
  • Various NGS Platforms (Video)
  • Discuss the Advantages and Limitations of the Sequencing Technology and Role of Bioinformatics
  • Various File Formats in NGS
  • Reads Quality Check
  • Alignment of Reads using Reference Genome
  • Mapping of Aligned Reads to the Reference Genome
  • Variant Calling/ Variant Detection for Mutations
  • Introduction to the Unix/Linux environment (Important Commands).
  • Whats is MetaGenomics?
  • Evolution of Metagenomic Sequencing
  • Amplicon Sequencing and Shotgun Sequencing
  • What is 16s rRNA Sequencing?

PRACTICAL APPLICATION- In the workshop, we will perform 3 experiments to analyze the example RNASeq, DNASeq & MetaGenomics. Hands-on exercises will be performed individually using software tools on your own laptops. No prior software experience is required.
SCHEDULE | DAY 1
EXPERIMENT 1
In this lesson, we will focus on the SNPs and Variant Calling (VC) of the DNASeq data and cover:

  • Deal with the raw data for quality evaluation and filtering
  • Map reads to the reference genomes, call SNPs and predict their phenotype consequence
  • Alignment to a reference genome, SNPs and In-dels Calling of next generation DNA data

SCHEDULE | DAY 2
EXPERIMENT 2
In this lesson, we will focus on the Differential expression of Genes (DEGs) of the RNASeq data and will cover:

  • Upload Data
  • Convert File Format
  • Align Reads To Reference Genome
  • View The Mapped Reads In JBrowse
  • Count Reads Per Gene
  • Test For Differential Expression
  • Differential Gene Expression
  • MDS Plot
  • MA Plot
  • Volcano Plot
  • Parallel Coordinates and Heatmap
  • Investigate Differentially-Expressed Genes
  • Chord Diagram

EXPERIMENT 3
In this lesson, we will focus on the MetaGenomics Analysis in 16S rRNA | Amplicon Sequencing Data Analysis (OTUs) and will cover:

  • File Optimization- Loading of data & optimizing it according to our experiment.
  • Quality Control- Check sequencing quality
  • Sequence Alignment- Grouping/Alignment of reads
  • Extraction of Taxonomic Information- Operational Taxonomic Units (OTUs)- Clustering Sequences
  • Visualization- Examine diversity of species/taxa present within a single sample, Comparison of species/taxa diversity between two samples & Taxonomic Diversity- How many species are in a sample? What are the differences in species between samples?

TARGET AUDIENCE: Student: Bachelor, Masters, Ph.D., MBBS, MD students as well as Faculty and Professors from Microbiology, Biochemistry, Biotechnology, Immunology, Medicine, Pharmacy, Pharmaceutical Chemistry, Biomedical Technology, Genetics, Bioinformatics, Plant Science and Life Sciences.

Professionals: Resident Doctors, Biotechnology, Bioinformatics, Medicine and Pharmaceutical scientists from industry, academia, and regulatory agencies. Hands-on exercises will be performed individually using software tools on your own laptops. (no prior experience required).

QUERIES

  • eMail- workshops@biodiscoverygroup.com, sarah@biodiscoverygroup.com
  • For a quick response, just WhatsApp: +917017955472

T & C

  • Kindly make English as your default language of the computer system.
  • The invitation letter for the visa will be provided only when you register and pay.
  • While buying the ticket choose the right category of registration in which you fall. If you register under the wrong category then your registration will be invalid and NO REFUND WILL BE MADE IN THIS CASE. This is your mistake and the company is not responsible for it.
  • Once registration is done it is NON-REFUNDABLE/NON TRANSFERABLE.
  • Once you register we will send you Welcome email 5 days prior to the event. This email will have all detail of files, software, etc.
  • You need to follow the instructions in the welcome email and prepare your system accordingly.
  • If you do not turn up for the training session on any day then NO CERTIFICATE WILL BE AWARDED TO YOU.
  • Timings are to be strictly followed- If you are late for more than 15 minutes from the start then you will not be allowed to enter on that particular day.
  • The certificate will be given only when you attend all sessions and of the category in which you have registered.
  • Please bring your PHOTO ID of College/ Department/ Institute/ University/ Company for verification.
  • Please bring the PRINT OUT of the ticket which you have got after registration. We need a HARD COPY. Without PHOTO ID and PRINT OUT of ticket entry will not be given.
  • Our workshops depend on participants who register hence if we do not achieve our break-even to conduct the event we cancel the event. In this case, the amount of the registration will be refunded and not the payment gateway charges.
  • In case the date of the event changes and you do not want to join on those dates and ask for a refund, then only the ticket amount will be refunded and not the payment gateway charges. This amount is charged by the payment gateway and is not collected by BDG Lifesciences hence that amount will not be refunded.
  •  The venue of the event can be changed depending on the decision of the management of BDG Lifesciences (OPC) Private Limited.

Wisma UOA II, KLCC, Level 6, Lobby A, Wisma UOA II, No 21 Jalan Pinang

Kuala Lumpur

KUALA LUMPUR | 2- DAY WORKSHOP IN NGS DATA ANALYSIS | WHOLE GENOME, RNA & METAGENOMICS

Registrations are not available

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